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Todo Backlog Sync Audit

  • Audit date: 2026-03-18 (Asia/Tbilisi)
  • Repository root: /home/standard/dspy_rag_in_repo_docs_and_impl1
  • Git HEAD during final verification: 4afbfed0a014b52b114289e07a908d31a8a8295b

Scope

This audit captures the TODO-backlog sync work that turned the repository backlog into a linkified emoji table, mirrored that table into the publication PDF build, recorded the workflow as a repo-local agent skill, and restored the current branch's missing DSPy and notebook-runner Python surfaces so the repository could pass its full quality gate again.

Executed Commands

Executed successfully in this turn:

  • uv run repo-rag sync-todo-backlog --root .
  • uv run python -m compileall src tests
  • uv run pytest tests/test_utilities.py tests/test_repository_rag_bdd.py tests/test_cli_and_dspy.py tests/test_project_surfaces.py tests/test_todo_backlog.py tests/test_dspy_training.py tests/test_notebook_runner.py tests/test_benchmarks_and_notebook_scaffolding.py tests/test_verification.py
  • make hooks-install
  • make paper-build
  • uv run repo-rag smoke-test
  • cargo build --manifest-path rust-cli/Cargo.toml
  • uv run mypy src tests
  • uv run basedpyright
  • make quality
  • make gh-runs GH_RUN_LIMIT=10
  • RUN_ID=23225822736 make gh-watch
  • RUN_ID=23225822742 make gh-watch
  • gh run view 23225822736
  • gh run view 23225822742

Notable Results

  • uv run repo-rag sync-todo-backlog --root .: passed, generating TODO.MD and publication/todo-backlog-table.tex from todo-backlog.yaml
  • targeted pytest slice: passed, 59 tests
  • make hooks-install: passed
  • make paper-build: passed, rebuilding the publication PDF and banner with the synced backlog table included
  • uv run repo-rag smoke-test: passed with answer_contains_repository: true, mcp_candidate_count: 1
  • cargo build --manifest-path rust-cli/Cargo.toml: passed
  • uv run mypy src tests: passed
  • uv run basedpyright: passed
  • make quality: passed with 79 tests and 85.19% total coverage
  • post-push GitHub Actions: both CI (23225822736) and Publication PDF (23225822742) completed with success for 4afbfed0a014b52b114289e07a908d31a8a8295b

Current Verification Status

Configured and verified in this turn:

  • Compile checks: present and passed through uv run python -m compileall src tests
  • Utility and surface pytest coverage: present and passed through the targeted pytest slice above
  • Publication build: present and passed through make paper-build
  • Repository smoke test: present and passed through uv run repo-rag smoke-test
  • Rust build: present and passed through cargo build --manifest-path rust-cli/Cargo.toml
  • Lint, notebook lint, mypy, basedpyright, repository-surface verification, complexity, pytest, and coverage: present and passed through make quality
  • Post-push GitHub Actions: present and passed through the CI and Publication PDF workflows

Still absent or not exercised in this turn:

  • UI or browser tests: none found in the repository configuration
  • Live Azure endpoint probes: not re-run in this turn
  • Full notebook execution batch: the runner surface is present and tested, but make notebook-report was not executed end-to-end in this turn

Notes

  • The backlog is now maintained from todo-backlog.yaml, rendered into a Markdown table in TODO.MD, and injected into the publication article through publication/todo-backlog-table.tex.
  • The publication workflow now syncs the backlog tables before compiling the PDF so future TODO-only changes do not rely on stale generated output.
  • The branch that became HEAD for this turn referenced src/repo_rag_lab/dspy_training.py and src/repo_rag_lab/notebook_runner.py from multiple surfaces without tracking those files in Git; this turn restored those modules and the matching tests so fresh checkouts can pass local and CI validation again.
  • GitHub Actions still emits Node.js 20 deprecation warnings for actions/checkout@v4, actions/upload-artifact@v4, actions/cache@v4, and astral-sh/setup-uv@v6.